STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1476Putative cellobiose phosphotransferase. (148 aa)    
Predicted Functional Partners:
LBA0171
Glycosyltransferase.
 
   
 0.804
LBA0170
Putative 6-pyruvoyl-tetrahydropterin synthase.
     
 0.751
LBA0173
Uncharacterized conserved membrane protein.
      
 0.751
LBA1655
RecA protein (Recombinase A).
      
 0.750
LBA1656
Hypothetical protein.
      
 0.750
LBA1478
PTS enzyme IIABC.
     
 0.722
licT-2
Transcriptional antiterminator LicT.
       0.656
LBA1477
Putative sugar hydrolase.
       0.647
fruA
PTS system, fructose-specific enzyme II.
     
 0.640
rbsK-2
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.614
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.