STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1516L-LDH; COG0039 Malate-lactate dehydrogenases; Belongs to the LDH/MDH superfamily. (304 aa)    
Predicted Functional Partners:
ldhD
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.989
kpyK
Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family.
  
 0.980
LBA1075
Malolactic enzyme.
  
 0.933
citH
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
  
0.930
poxB
Pyruvate oxidase; COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome); Belongs to the TPP enzyme family.
  
 0.922
ldh1
L-LDH; Catalyzes the conversion of lactate to pyruvate.
  
  
 
0.915
pgi
COG0166 Glucose-6-phosphate isomerase.
  
 
 0.912
fbaA
COG0191 Fructose-tagatose bisphosphate aldolase.
   
 
 0.846
LBA1098
Glucose 1-dehydrogenase; Adh_short, short chain dehydrogenase.
  
 0.841
zwf
Glucose-6-p 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.834
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.