STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1577Transcriptional regulator. (277 aa)    
Predicted Functional Partners:
rpiR-2
Transcriptional regulator; Family; RpiR.
  
     0.769
LBA1172
COG1737 transcriptional regulators.
  
     0.750
LBA1575
Beta-glucoside-specific enzyme II; Potential frameshift to 1576.
  
  
 0.578
fruA
PTS system, fructose-specific enzyme II.
     
 0.517
LBA1578
Putative serine protease; Putative integral membrane protein.
       0.516
LBA1576
Beta-glucoside-specific enzyme II; Potential frameshift to 1575; phosphotransferase system (PTS) beta-glucoside-specific enzyme.
  
  
 0.515
bglH
Beta-glucosidase; BglH; similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
    0.489
murQ
Putative glucokinase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.467
scrA
Sucrose PTS transporter.
  
  
 0.463
LBA0725
COG1263 Phosphotransferase system IIC components, glucose-maltose-N-acetylglucosamine-specific.
  
  
 0.463
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.