Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LBA1609Putative mucus binding protein precursor. (643 aa)    
Predicted Functional Partners:
LBA1460
Putative mucus binding protein precursor; Cell surface protein precursor.
 
     0.736
LBA1017
Putative mucus binding protein; Potential frameshift to 1019.
 
     0.714
LBA1633
Surface protein.
 
     0.703
LBA1607
Phosphatidylserine decarboxylase precursor; Belongs to the phosphatidylserine decarboxylase family.
 
     0.675
LBA1634
Surface protein; Rlp.
 
     0.660
LBA1110
Hypothetical protein.
  
     0.637
LBA1348
Kanamycin kinase; COG3231 Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family.
  
     0.599
LBA1775
Hypothetical protein.
 
    0.595
LBA1652
Cell surface protein precursor.
 
     0.589
LBA1608
Hypothetical protein.
       0.535
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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