STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1660Sensor protein. (441 aa)    
Predicted Functional Partners:
LBA1659
Response regulator.
 
 0.982
lisR
Two-component system regulator; COG0745 Response regulators conserved isting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.913
LBA0078
VicR; COG0745 Response regulators conserved isting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.888
LBA1820
COG0745 Response regulators conserved isting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.886
LBA0746
COG0745 Response regulators conserved isting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.871
LBA1431
COG0745 Response regulators conserved isting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.848
LBA1661
COG3212 Predicted membrane protein.
 
  
 0.790
rbsB
D-ribose-binding protein precursor; RbsB.
   
 
 0.696
LBA1662
COG3212 Predicted membrane protein.
 
  
 0.688
LBA1658
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
 
 0.676
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.