STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1661COG3212 Predicted membrane protein. (180 aa)    
Predicted Functional Partners:
LBA1660
Sensor protein.
 
  
 0.790
LBA1662
COG3212 Predicted membrane protein.
 
    
0.789
mutR
Transcriptional regulator; MutR; hypothetical protein.
 
     0.654
LBA1659
Response regulator.
 
  
 0.640
marR-2
Transcriptional regulator.
 
     0.640
LBA1664
Acetyltransferase.
  
   0.613
LBA1652
Cell surface protein precursor.
 
     0.457
LBA0612
Transport protein.
  
    0.442
LBA0635
Transporter protein -putative hemolysin.
  
    0.442
LBA1658
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
       0.442
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.