STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1667Hypothetical protein. (193 aa)    
Predicted Functional Partners:
LBA1184
Hypothetical protein.
  
     0.695
xerD-2
Putative integrase-recombinase; XerD; hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.627
LBA1186
Hypothetical protein.
  
     0.599
LBA1229
Hypothetical protein; Transcriptional regulator.
  
     0.542
LBA1666
COG3759 Predicted membrane protein.
       0.511
LBA1187
Hypothetical protein.
 
     0.473
LBA0371
K+ channel.
 
 
   0.457
LBA1810
Hypothetical protein.
 
     0.450
pspC
Surface protein PspC.
  
     0.447
LBA0612
Transport protein.
  
    0.442
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.