Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LBA0127 | LBA1723 | LBA0127 | LBA1723 | Transposase. | Transposase. | 0.407 |
LBA0489 | LBA1567 | LBA0489 | LBA1567 | Serine-threonine protein phosphatase. | Aminopeptidase N. | 0.571 |
LBA0489 | LBA1723 | LBA0489 | LBA1723 | Serine-threonine protein phosphatase. | Transposase. | 0.533 |
LBA0489 | xerD-2 | LBA0489 | LBA0991 | Serine-threonine protein phosphatase. | Putative integrase-recombinase; XerD; hypothetical protein; Belongs to the 'phage' integrase family. | 0.614 |
LBA0614 | LBA1723 | LBA0614 | LBA1723 | Transposase. | Transposase. | 0.407 |
LBA0835 | LBA1723 | LBA0835 | LBA1723 | Hypothetical protein; COG0742 N6-adenine-specific methylase. | Transposase. | 0.514 |
LBA1299 | LBA1723 | LBA1299 | LBA1723 | Transposase. | Transposase. | 0.407 |
LBA1475 | LBA1723 | LBA1475 | LBA1723 | Transposase. | Transposase. | 0.407 |
LBA1567 | LBA0489 | LBA1567 | LBA0489 | Aminopeptidase N. | Serine-threonine protein phosphatase. | 0.571 |
LBA1567 | LBA1723 | LBA1567 | LBA1723 | Aminopeptidase N. | Transposase. | 0.474 |
LBA1721 | LBA1722 | LBA1721 | LBA1722 | Transposase; Potential frameshift to 1722. | Transposase; Potential frameshift to 1721. | 0.857 |
LBA1721 | LBA1723 | LBA1721 | LBA1723 | Transposase; Potential frameshift to 1722. | Transposase. | 0.550 |
LBA1722 | LBA1721 | LBA1722 | LBA1721 | Transposase; Potential frameshift to 1721. | Transposase; Potential frameshift to 1722. | 0.857 |
LBA1722 | LBA1723 | LBA1722 | LBA1723 | Transposase; Potential frameshift to 1721. | Transposase. | 0.496 |
LBA1723 | LBA0127 | LBA1723 | LBA0127 | Transposase. | Transposase. | 0.407 |
LBA1723 | LBA0489 | LBA1723 | LBA0489 | Transposase. | Serine-threonine protein phosphatase. | 0.533 |
LBA1723 | LBA0614 | LBA1723 | LBA0614 | Transposase. | Transposase. | 0.407 |
LBA1723 | LBA0835 | LBA1723 | LBA0835 | Transposase. | Hypothetical protein; COG0742 N6-adenine-specific methylase. | 0.514 |
LBA1723 | LBA1299 | LBA1723 | LBA1299 | Transposase. | Transposase. | 0.407 |
LBA1723 | LBA1475 | LBA1723 | LBA1475 | Transposase. | Transposase. | 0.407 |
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