STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1727Polysaccharide polymerase. (431 aa)    
Predicted Functional Partners:
LBA1726
UDPgalactopyranose mutase; Potential frameshift to 1725; UDP-galactopyranose mutase.
       0.787
epsE
Phospho-glucosyltransferase; EpsE.
     
 0.738
LBA1731
COG1216 Predicted glycosyltransferases.
       0.736
epsF
Glycosyltransferase.
       0.734
LBA1728
Glycosyl transferase.
       0.718
LBA1729
Hypothetical protein.
       0.708
LBA1730
Hypothetical protein; COG0058 Glucan phosphorylase.
       0.708
epsD
Exopolysaccharide biosynthesis protein; EpsD.
       0.576
epsC
Exopolysaccharide biosynthesis protein; EpsC.
       0.575
epsB
Exopolysaccharide biosynthesis protein; EpsB.
       0.574
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.