STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1857Integral membrane protein. (373 aa)    
Predicted Functional Partners:
plnI-2
Immunity protein; PlnI.
 
   
 0.510
LBA1082
Hypothetical protein.
  
  
 0.504
LBA1808
Hypothetical protein.
 
   
 0.475
LBA0248
Hypothetical protein.
 
    0.445
LBA1349
COG4907 Predicted membrane protein.
  
     0.420
LBA0087
Putative protease.
 
   
 0.405
LBA0594
ABC transporter ATP-binding and membrane spanning permease.
 
     0.405
LBA1690
Putative surface exclusion protein.
  
     0.402
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.