node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LBA1523 | RpsA | LBA1523 | LBA0968 | Putative family protein; SpoIIIJ. | COG0539 Ribosomal protein S1. | 0.490 |
LBA1523 | dnaA | LBA1523 | LBA0001 | Putative family protein; SpoIIIJ. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.463 |
LBA1523 | gidA-2 | LBA1523 | LBA1975 | Putative family protein; SpoIIIJ. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.586 |
LBA1523 | rnpA | LBA1523 | LBA1978 | Putative family protein; SpoIIIJ. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.702 |
LBA1523 | rplC | LBA1523 | LBA0291 | Putative family protein; SpoIIIJ. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.623 |
LBA1523 | rplD | LBA1523 | LBA0292 | Putative family protein; SpoIIIJ. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.659 |
LBA1523 | rpmH | LBA1523 | LBA1979 | Putative family protein; SpoIIIJ. | COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.583 |
LBA1523 | rpsJ | LBA1523 | LBA0290 | Putative family protein; SpoIIIJ. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.597 |
LBA1523 | yidC | LBA1523 | LBA1977 | Putative family protein; SpoIIIJ. | Stage III sporulation protein J; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.926 |
RpsA | LBA1523 | LBA0968 | LBA1523 | COG0539 Ribosomal protein S1. | Putative family protein; SpoIIIJ. | 0.490 |
RpsA | rnpA | LBA0968 | LBA1978 | COG0539 Ribosomal protein S1. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.673 |
RpsA | rplC | LBA0968 | LBA0291 | COG0539 Ribosomal protein S1. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.944 |
RpsA | rplD | LBA0968 | LBA0292 | COG0539 Ribosomal protein S1. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.972 |
RpsA | rpmH | LBA0968 | LBA1979 | COG0539 Ribosomal protein S1. | COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.629 |
RpsA | rpsJ | LBA0968 | LBA0290 | COG0539 Ribosomal protein S1. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.941 |
RpsA | yidC | LBA0968 | LBA1977 | COG0539 Ribosomal protein S1. | Stage III sporulation protein J; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.490 |
dnaA | LBA1523 | LBA0001 | LBA1523 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | Putative family protein; SpoIIIJ. | 0.463 |
dnaA | gidA-2 | LBA0001 | LBA1975 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.494 |
dnaA | rnpA | LBA0001 | LBA1978 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.675 |
dnaA | rpmH | LBA0001 | LBA1979 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.882 |