STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg0223Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
lpg0226
Multidrug efflux protein, outer membrane component.
 
     0.730
lpg0221
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.729
lpg0224
Toxin secretion ABC transporter HlyB/MsbA family ATP-binding protein.
 
     0.718
lpg0222
NADH dehydrogenase subunit 5.
 
     0.688
lpg0225
RND efflux membrane fusion protein.
       0.680
lpg1796
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.664
lpg0220
Hypothetical protein.
 
    0.643
lpg0219
Hypothetical protein.
 
     0.627
lpg0215
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.604
lpg0055
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.591
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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