STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg0667Hypothetical protein. (289 aa)    
Predicted Functional Partners:
lpg0666
Hypothetical protein.
 
    0.970
lpg0669
Hypothetical exported protein.
 
    0.959
lpg0665
Putative transmembrane protein.
 
  
 0.940
lpg2253
Hypothetical protein.
 
    0.876
lpg0675
Hypothetical protein.
  
    0.867
lpg1648
Signal peptide protein.
 
    0.867
lpg2106
Hypothetical protein.
  
    0.847
lpg0673
Signal peptide protein.
 
    0.813
lpg0668
Hypothetical protein.
       0.773
lpg2105
Transmembrane protein.
 
    0.749
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.