Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fliM | lpg0690 | lpg1792 | lpg0690 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical protein. | 0.860 |
fliM | lysC | lpg1792 | lpg1811 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Aspartokinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.491 |
fliM | metK | lpg1792 | lpg2022 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.491 |
hutG | lpg0007 | lpg0709 | lpg0007 | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Probable hydrolase. | 0.690 |
hutG | lpg0690 | lpg0709 | lpg0690 | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Hypothetical protein. | 0.605 |
hutG | lysC | lpg0709 | lpg1811 | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Aspartokinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.815 |
lpg0007 | hutG | lpg0007 | lpg0709 | Probable hydrolase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.690 |
lpg0007 | lpg0690 | lpg0007 | lpg0690 | Probable hydrolase. | Hypothetical protein. | 0.651 |
lpg0007 | lysC | lpg0007 | lpg1811 | Probable hydrolase. | Aspartokinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.513 |
lpg0187 | lpg0690 | lpg0187 | lpg0690 | Zinc metalloprotein; Conserved gene, peptidase, M20/M25/M40 family; acylases. | Hypothetical protein. | 0.479 |
lpg0187 | lysC | lpg0187 | lpg1811 | Zinc metalloprotein; Conserved gene, peptidase, M20/M25/M40 family; acylases. | Aspartokinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.556 |
lpg0622 | lpg0690 | lpg0622 | lpg0690 | Transmembrane protein. | Hypothetical protein. | 0.502 |
lpg0622 | lpg0742 | lpg0622 | lpg0742 | Transmembrane protein. | Hypothetical protein. | 0.653 |
lpg0622 | lpg1820 | lpg0622 | lpg1820 | Transmembrane protein. | Hypothetical protein. | 0.516 |
lpg0690 | fliM | lpg0690 | lpg1792 | Hypothetical protein. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.860 |
lpg0690 | hutG | lpg0690 | lpg0709 | Hypothetical protein. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.605 |
lpg0690 | lpg0007 | lpg0690 | lpg0007 | Hypothetical protein. | Probable hydrolase. | 0.651 |
lpg0690 | lpg0187 | lpg0690 | lpg0187 | Hypothetical protein. | Zinc metalloprotein; Conserved gene, peptidase, M20/M25/M40 family; acylases. | 0.479 |
lpg0690 | lpg0622 | lpg0690 | lpg0622 | Hypothetical protein. | Transmembrane protein. | 0.502 |
lpg0690 | lpg0742 | lpg0690 | lpg0742 | Hypothetical protein. | Hypothetical protein. | 0.508 |
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