Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dapE | lpg0805 | lpg0809 | lpg0805 | Succinyl-diaminopimelate desuccinylase. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.495 |
dapE | lpg0806 | lpg0809 | lpg0806 | Succinyl-diaminopimelate desuccinylase. | Na+/H+ antiporter. | 0.800 |
dapE | lpg0810 | lpg0809 | lpg0810 | Succinyl-diaminopimelate desuccinylase. | Hypothetical protein; Transport and binding, Transcription factors / DNA binding proteins. | 0.593 |
dapE | mreD | lpg0809 | lpg0813 | Succinyl-diaminopimelate desuccinylase. | Rod shape determining protein MreD. | 0.415 |
dapE | murG | lpg0809 | lpg0808 | Succinyl-diaminopimelate desuccinylase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.807 |
dapE | nadC | lpg0809 | lpg0807 | Succinyl-diaminopimelate desuccinylase. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.800 |
lpg0805 | dapE | lpg0805 | lpg0809 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Succinyl-diaminopimelate desuccinylase. | 0.495 |
lpg0805 | lpg0806 | lpg0805 | lpg0806 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Na+/H+ antiporter. | 0.495 |
lpg0805 | lpg0810 | lpg0805 | lpg0810 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Hypothetical protein; Transport and binding, Transcription factors / DNA binding proteins. | 0.401 |
lpg0805 | murG | lpg0805 | lpg0808 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.495 |
lpg0805 | nadC | lpg0805 | lpg0807 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.495 |
lpg0806 | dapE | lpg0806 | lpg0809 | Na+/H+ antiporter. | Succinyl-diaminopimelate desuccinylase. | 0.800 |
lpg0806 | lpg0805 | lpg0806 | lpg0805 | Na+/H+ antiporter. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.495 |
lpg0806 | lpg0810 | lpg0806 | lpg0810 | Na+/H+ antiporter. | Hypothetical protein; Transport and binding, Transcription factors / DNA binding proteins. | 0.593 |
lpg0806 | lpg1507 | lpg0806 | lpg1507 | Na+/H+ antiporter. | Sodium/hydrogen antiporter. | 0.657 |
lpg0806 | lpg1897 | lpg0806 | lpg1897 | Na+/H+ antiporter. | Glutathione-regulated potassium efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.448 |
lpg0806 | mreD | lpg0806 | lpg0813 | Na+/H+ antiporter. | Rod shape determining protein MreD. | 0.413 |
lpg0806 | murG | lpg0806 | lpg0808 | Na+/H+ antiporter. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.800 |
lpg0806 | nadC | lpg0806 | lpg0807 | Na+/H+ antiporter. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.800 |
lpg0810 | dapE | lpg0810 | lpg0809 | Hypothetical protein; Transport and binding, Transcription factors / DNA binding proteins. | Succinyl-diaminopimelate desuccinylase. | 0.593 |
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