STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg0819ORF2 transposase. (361 aa)    
Predicted Functional Partners:
lpg0820
Endonuclease.
       0.689
lpg0822
O-antigen biosynthesis protein.
 
     0.556
lpg2120
Transposase, IS4 family, Tn5.
  
     0.465
lpg0142
Transposase, IS4 family TnpA.
  
     0.460
lpg1086
Transposase, IS4 family TnpA.
  
     0.460
lpg2116
Transposase, IS4 family TnpA.
  
     0.460
lpg0821
Lipopolysaccharide biosynthesis glycosyltransferase.
       0.427
lpg1823
Hypothetical protein.
  
     0.419
cl
ATP binding protease component ClpA; Belongs to the ClpA/ClpB family.
       0.406
lpg2586
Cysteine protease, papain C1 family.
  
     0.401
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.