STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg0842Toluene tolerance protein Ttg2B. (260 aa)    
Predicted Functional Partners:
lpg0841
Toluene tolerance ABC transporter, ATP binding protein Ttg2A.
 
 0.999
lpg0843
Toluene tolerance protein Ttg2C.
 
 0.999
lpg2046
ABC transporter, ATP binding protein.
 
 0.991
rsbV
Hypothetical protein.
   
  0.986
lpg0844
Signal peptide protein, toluene tolerance protein Ttg2D.
 
 
 0.953
lpg2045
ABC transport system periplasmic substrate binding protein.
 
 0.925
lpg0169
Probable transmembrane protein.
  
 0.818
lpg2047
ABC transporter, permease.
  
  
 
0.809
lpg0836
ABC transporter, ATP binding protein.
    
  0.583
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.543
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.