STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg09053-oxoacyl-(acyl carrier protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)    
Predicted Functional Partners:
lpg2179
Peptide synthetase, non-ribosomal.
  
 0.870
pksJ
Polyketide synthase, type I.
  
 0.836
lpg2536
Ferredoxin reductase.
   
 0.778
lpg2261
Phosphate acetyl/butyryltransferase family protein) includes: (de)hydratase mit MaoC domain).
  
 0.773
lpg1044
Oxidoreductase, FAD-binding.
   
 0.769
fadH
2,4-dienoyl-CoA reductase FadH1.
 
  
 0.747
lpg2581
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 0.709
lpg0870
3-hydroxyisobutyryl Coenzyme A hydrolase.
  
 
  0.683
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
   0.682
rfbA-3
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.669
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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