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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg1007Cation efflux system HelB. (418 aa)    
Predicted Functional Partners:
lpg1008
Cobalt/zinc/cadmium efflux RND transporter, permease protein HelA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.969
lpg1006
Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein.
 
  0.968
lpg1020
Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.855
lpg1096
Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.854
lpg1018
Chemiosmotic efflux system B protein C.
  
  0.770
cadA-1
Cadmium translocating P-type ATPase CadA.
 
    0.755
lpg1094
Chemiosmotic efflux system B protein C.
  
  0.753
lpg2134
Chemiosmotic efflux system protein A (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.753
lpg1029
Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.752
lpg2136
Chemiosmotic efflux system protein C (CzcC).
 
  0.600
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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