Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
lpg1007 | lpg1027 | Cation efflux system HelB. | Chemiosmotic efflux system C protein C. | 0.591 |
lpg1007 | lpg1029 | Cation efflux system HelB. | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.752 |
lpg1007 | lpg2136 | Cation efflux system HelB. | Chemiosmotic efflux system protein C (CzcC). | 0.600 |
lpg1019 | lpg1027 | Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system C protein C. | 0.596 |
lpg1019 | lpg1029 | Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.860 |
lpg1019 | lpg2136 | Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system protein C (CzcC). | 0.530 |
lpg1026 | lpg1027 | Putative outer membrane lipoprotein. | Chemiosmotic efflux system C protein C. | 0.773 |
lpg1026 | lpg1028 | Putative outer membrane lipoprotein. | Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.782 |
lpg1026 | lpg1029 | Putative outer membrane lipoprotein. | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.773 |
lpg1026 | lpg1030 | Putative outer membrane lipoprotein. | Hypothetical protein. | 0.779 |
lpg1027 | lpg1007 | Chemiosmotic efflux system C protein C. | Cation efflux system HelB. | 0.591 |
lpg1027 | lpg1019 | Chemiosmotic efflux system C protein C. | Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.596 |
lpg1027 | lpg1026 | Chemiosmotic efflux system C protein C. | Putative outer membrane lipoprotein. | 0.773 |
lpg1027 | lpg1028 | Chemiosmotic efflux system C protein C. | Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.952 |
lpg1027 | lpg1029 | Chemiosmotic efflux system C protein C. | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.909 |
lpg1027 | lpg1030 | Chemiosmotic efflux system C protein C. | Hypothetical protein. | 0.785 |
lpg1027 | lpg1095 | Chemiosmotic efflux system C protein C. | Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.537 |
lpg1027 | lpg2135 | Chemiosmotic efflux system C protein C. | Chemiosmotic efflux system protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.772 |
lpg1028 | lpg1026 | Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative outer membrane lipoprotein. | 0.782 |
lpg1028 | lpg1027 | Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system C protein C. | 0.952 |
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