Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
glnA | gspF | lpg1364 | lpg1363 | Glutamine synthetase, type I. | Type II protein secretion LspF. | 0.601 |
glnA | lpg1365 | lpg1364 | lpg1365 | Glutamine synthetase, type I. | Hypothetical protein. | 0.777 |
glnA | lpg1366 | lpg1364 | lpg1366 | Glutamine synthetase, type I. | Hypothetical protein; Belongs to the UPF0246 family. | 0.754 |
glnA | lpg1367 | lpg1364 | lpg1367 | Glutamine synthetase, type I. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.717 |
glnA | xcpU | lpg1364 | lpg1361 | Glutamine synthetase, type I. | General secretion pathway protein LspH. | 0.509 |
glnA | xcpW | lpg1364 | lpg1359 | Glutamine synthetase, type I. | General secretion pathway protein LspJ. | 0.460 |
glnA | xcpX | lpg1364 | lpg1358 | Glutamine synthetase, type I. | General secretion pathway protein LspK. | 0.460 |
gspF | glnA | lpg1363 | lpg1364 | Type II protein secretion LspF. | Glutamine synthetase, type I. | 0.601 |
gspF | lpg1365 | lpg1363 | lpg1365 | Type II protein secretion LspF. | Hypothetical protein. | 0.586 |
gspF | lpg1366 | lpg1363 | lpg1366 | Type II protein secretion LspF. | Hypothetical protein; Belongs to the UPF0246 family. | 0.543 |
gspF | lpg1367 | lpg1363 | lpg1367 | Type II protein secretion LspF. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.546 |
gspF | xcpU | lpg1363 | lpg1361 | Type II protein secretion LspF. | General secretion pathway protein LspH. | 0.908 |
gspF | xcpW | lpg1363 | lpg1359 | Type II protein secretion LspF. | General secretion pathway protein LspJ. | 0.857 |
gspF | xcpX | lpg1363 | lpg1358 | Type II protein secretion LspF. | General secretion pathway protein LspK. | 0.843 |
lpg1365 | glnA | lpg1365 | lpg1364 | Hypothetical protein. | Glutamine synthetase, type I. | 0.777 |
lpg1365 | gspF | lpg1365 | lpg1363 | Hypothetical protein. | Type II protein secretion LspF. | 0.586 |
lpg1365 | lpg1366 | lpg1365 | lpg1366 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0246 family. | 0.777 |
lpg1365 | lpg1367 | lpg1365 | lpg1367 | Hypothetical protein. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.738 |
lpg1365 | lpg1368 | lpg1365 | lpg1368 | Hypothetical protein. | Hypothetical protein. | 0.404 |
lpg1365 | xcpU | lpg1365 | lpg1361 | Hypothetical protein. | General secretion pathway protein LspH. | 0.529 |
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