Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lpg1606Hypothetical protein; Belongs to the methyltransferase superfamily. (219 aa)    
Predicted Functional Partners:
lpg2221
Hypothetical protein.
  
     0.680
legA10
Ankyrin repeat-containing protein; 4921520G13 gene product; conserved gene.
  
     0.675
lpg1126
Calcium-transporting ATPase.
  
     0.667
lpg2077
TraI.
 
     0.658
lpg1918
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.654
lpg2061
Major facilitator family transporter.
  
     0.650
traG
TraG.
  
     0.646
lpg1108
Putative lipase.
  
     0.643
lpg1326
Hypothetical protein.
  
     0.637
lpg1955
Hypothetical permease.
  
     0.636
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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