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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg1628Coenzyme F390 synthetase FtsA. (436 aa)    
Predicted Functional Partners:
lpg1629
Zn-dependent hydrolase GumP.
 
     0.947
lpg1630
3-beta-hydroxysteroid dehydrogenase/isomerase.
 
     0.929
lpg1631
Chalcone and stilbene synthases.
 
     0.825
lpg1044
Oxidoreductase, FAD-binding.
 
 
 0.793
lpg2073
Hypothetical protein.
  
     0.703
lpg2076
Hypothetical protein.
  
     0.586
lpg1034
Hypothetical protein.
  
     0.583
lpg0629
Tfp pilus assembly protein PilX.
  
     0.579
lpg1104
Hypothetical protein.
  
     0.577
lpg1633
Hypothetical protein.
       0.561
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.