STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg1918Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (476 aa)    
Predicted Functional Partners:
lpg1116
Chitinase.
  
  
 0.842
legA10
Ankyrin repeat-containing protein; 4921520G13 gene product; conserved gene.
  
  
  0.793
lpg1126
Calcium-transporting ATPase.
  
     0.774
lpg2061
Major facilitator family transporter.
  
     0.774
lpg2077
TraI.
  
    0.774
lpg2221
Hypothetical protein.
  
     0.774
lpg2324
L-gulono-gamma-lactone oxidase.
  
     0.774
lpg0498
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
  
     0.771
lpg1955
Hypothetical permease.
  
     0.771
traG
TraG.
  
     0.771
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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