STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg2136Chemiosmotic efflux system protein C (CzcC). (448 aa)    
Predicted Functional Partners:
lpg2135
Chemiosmotic efflux system protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.946
lpg2134
Chemiosmotic efflux system protein A (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
  0.919
lpg1028
Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.799
lpg0986
Membrane protein.
  
     0.759
lpg0988
Hypothetical protein.
  
     0.758
lpg1000
Putative exported protein.
  
     0.757
lpg0987
Membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT.
  
     0.756
lpg0989
Type IV secretory protein VirB4 components.
  
    0.753
lpg0991
Exported membrane protein.
  
     0.753
lpg0998
Hypothetical protein.
  
     0.751
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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