STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg2171Hypothetical protein. (336 aa)    
Predicted Functional Partners:
lpg1613
Acetyltransferase, GNAT family.
  
     0.745
lpg2398
Aminoglycoside 6'-N-acetyltransferase.
 
 
  0.743
aacA4-2
Aminoglycoside N(6')acetyltransferase.
  
    0.733
lpg1492
Spectinomycin phosphotransferase.
 
     0.727
lpg1104
Hypothetical protein.
  
     0.719
yqkA
Glutamate rich protein GrpB.
 
    0.717
lpg0514
Protein fate / hydrolases / secretion.
 
 
  0.604
lpg0553
Aminoglycoside phosphotransferase.
 
     0.582
lpg0522
Acetyltransferase, GNAT family.
 
  
 0.575
lpg2168
Acetyltransferase, GNAT family.
 
     0.561
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.