Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ackA2 | cbpA | lpg2262 | lpg2263 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Curved DNA binding protein DnaJ. | 0.665 |
| ackA2 | lpg2180 | lpg2262 | lpg2180 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Sensory box histidine kinase/response regulator. | 0.440 |
| ackA2 | lpg2261 | lpg2262 | lpg2261 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate acetyl/butyryltransferase family protein) includes: (de)hydratase mit MaoC domain). | 0.999 |
| ackA2 | lpg2264 | lpg2262 | lpg2264 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Hypothetical protein; Transcription factors / DNA binding proteins. | 0.685 |
| ackA2 | phbC-3 | lpg2262 | lpg2260 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | PHA synthase. | 0.837 |
| cbpA | ackA2 | lpg2263 | lpg2262 | Curved DNA binding protein DnaJ. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.665 |
| cbpA | lpg2180 | lpg2263 | lpg2180 | Curved DNA binding protein DnaJ. | Sensory box histidine kinase/response regulator. | 0.468 |
| cbpA | lpg2261 | lpg2263 | lpg2261 | Curved DNA binding protein DnaJ. | Phosphate acetyl/butyryltransferase family protein) includes: (de)hydratase mit MaoC domain). | 0.786 |
| cbpA | lpg2264 | lpg2263 | lpg2264 | Curved DNA binding protein DnaJ. | Hypothetical protein; Transcription factors / DNA binding proteins. | 0.997 |
| cbpA | phbC-3 | lpg2263 | lpg2260 | Curved DNA binding protein DnaJ. | PHA synthase. | 0.638 |
| dnaJ | lpg2180 | lpg2024 | lpg2180 | Heat shock protein DnaJ, chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interact [...] | Sensory box histidine kinase/response regulator. | 0.468 |
| dnaJ | lpg2264 | lpg2024 | lpg2264 | Heat shock protein DnaJ, chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interact [...] | Hypothetical protein; Transcription factors / DNA binding proteins. | 0.910 |
| lpg0891 | lpg1357 | lpg0891 | lpg1357 | Sensory box protein/GGDEF/EAL domains. | Inner membrane protein PLUS sensory box protein LssE. | 0.719 |
| lpg0891 | lpg2180 | lpg0891 | lpg2180 | Sensory box protein/GGDEF/EAL domains. | Sensory box histidine kinase/response regulator. | 0.993 |
| lpg0891 | lpg2264 | lpg0891 | lpg2264 | Sensory box protein/GGDEF/EAL domains. | Hypothetical protein; Transcription factors / DNA binding proteins. | 0.602 |
| lpg0891 | rre41 | lpg0891 | lpg0029 | Sensory box protein/GGDEF/EAL domains. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.729 |
| lpg1357 | lpg0891 | lpg1357 | lpg0891 | Inner membrane protein PLUS sensory box protein LssE. | Sensory box protein/GGDEF/EAL domains. | 0.719 |
| lpg1357 | lpg2180 | lpg1357 | lpg2180 | Inner membrane protein PLUS sensory box protein LssE. | Sensory box histidine kinase/response regulator. | 0.993 |
| lpg1357 | lpg2264 | lpg1357 | lpg2264 | Inner membrane protein PLUS sensory box protein LssE. | Hypothetical protein; Transcription factors / DNA binding proteins. | 0.602 |
| lpg1357 | rre41 | lpg1357 | lpg0029 | Inner membrane protein PLUS sensory box protein LssE. | Sensory box (GGDEF/EAL domain) regulatory protein. | 0.736 |
page 1 of 3