Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
edd | lpg2386 | lpg0418 | lpg2386 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Hypothetical protein. | 0.749 |
edd | pgl | lpg0418 | lpg0417 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.990 |
edd | zwf | lpg0418 | lpg0416 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Glucose-6-phosphate-1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.994 |
lpg0904 | lpg2386 | lpg0904 | lpg2386 | Hydrolase, isochorismatase family. | Hypothetical protein. | 0.417 |
lpg1955 | lpg1956 | lpg1955 | lpg1956 | Hypothetical permease. | Chloromuconate cycloisomerase. | 0.836 |
lpg1955 | lpg2386 | lpg1955 | lpg2386 | Hypothetical permease. | Hypothetical protein. | 0.445 |
lpg1956 | lpg1955 | lpg1956 | lpg1955 | Chloromuconate cycloisomerase. | Hypothetical permease. | 0.836 |
lpg1956 | lpg2386 | lpg1956 | lpg2386 | Chloromuconate cycloisomerase. | Hypothetical protein. | 0.661 |
lpg2386 | edd | lpg2386 | lpg0418 | Hypothetical protein. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.749 |
lpg2386 | lpg0904 | lpg2386 | lpg0904 | Hypothetical protein. | Hydrolase, isochorismatase family. | 0.417 |
lpg2386 | lpg1955 | lpg2386 | lpg1955 | Hypothetical protein. | Hypothetical permease. | 0.445 |
lpg2386 | lpg1956 | lpg2386 | lpg1956 | Hypothetical protein. | Chloromuconate cycloisomerase. | 0.661 |
lpg2386 | pdxB | lpg2386 | lpg0918 | Hypothetical protein. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.418 |
lpg2386 | pgl | lpg2386 | lpg0417 | Hypothetical protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.774 |
lpg2386 | pncA | lpg2386 | lpg0271 | Hypothetical protein. | Bifunctional pyrazinamidase/nicotinamidase. | 0.417 |
lpg2386 | rpe | lpg2386 | lpg0664 | Hypothetical protein. | D-ribulose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.681 |
lpg2386 | serA | lpg2386 | lpg0242 | Hypothetical protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.418 |
lpg2386 | zwf | lpg2386 | lpg0416 | Hypothetical protein. | Glucose-6-phosphate-1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.776 |
pdxB | lpg2386 | lpg0918 | lpg2386 | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | Hypothetical protein. | 0.418 |
pgl | edd | lpg0417 | lpg0418 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.990 |
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