Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aas | lpg1044 | lpg0597 | lpg1044 | 2-acylglycerophosphoethanolamine acyltransferase. | Oxidoreductase, FAD-binding. | 0.420 |
aas | lpg1940 | lpg0597 | lpg1940 | 2-acylglycerophosphoethanolamine acyltransferase. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.789 |
aas | lpg2179 | lpg0597 | lpg2179 | 2-acylglycerophosphoethanolamine acyltransferase. | Peptide synthetase, non-ribosomal. | 0.994 |
aas | lpg2403 | lpg0597 | lpg2403 | 2-acylglycerophosphoethanolamine acyltransferase. | Hypothetical protein. | 0.971 |
aas | lpg2536 | lpg0597 | lpg2536 | 2-acylglycerophosphoethanolamine acyltransferase. | Ferredoxin reductase. | 0.466 |
aas | pksJ | lpg0597 | lpg2186 | 2-acylglycerophosphoethanolamine acyltransferase. | Polyketide synthase, type I. | 0.992 |
aas | rplF | lpg0597 | lpg0344 | 2-acylglycerophosphoethanolamine acyltransferase. | 50S ribosomal protein L6/(L9E); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.879 |
aas | rplO | lpg0597 | lpg0348 | 2-acylglycerophosphoethanolamine acyltransferase. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.864 |
lpg0830 | lpg2179 | lpg0830 | lpg2179 | Hypothetical protein. | Peptide synthetase, non-ribosomal. | 0.902 |
lpg0830 | lpg2403 | lpg0830 | lpg2403 | Hypothetical protein. | Hypothetical protein. | 0.948 |
lpg0830 | pksJ | lpg0830 | lpg2186 | Hypothetical protein. | Polyketide synthase, type I. | 0.976 |
lpg1044 | aas | lpg1044 | lpg0597 | Oxidoreductase, FAD-binding. | 2-acylglycerophosphoethanolamine acyltransferase. | 0.420 |
lpg1044 | lpg2179 | lpg1044 | lpg2179 | Oxidoreductase, FAD-binding. | Peptide synthetase, non-ribosomal. | 0.603 |
lpg1044 | lpg2403 | lpg1044 | lpg2403 | Oxidoreductase, FAD-binding. | Hypothetical protein. | 0.984 |
lpg1044 | lpg2536 | lpg1044 | lpg2536 | Oxidoreductase, FAD-binding. | Ferredoxin reductase. | 0.840 |
lpg1044 | pksJ | lpg1044 | lpg2186 | Oxidoreductase, FAD-binding. | Polyketide synthase, type I. | 0.992 |
lpg1044 | polI | lpg1044 | lpg0099 | Oxidoreductase, FAD-binding. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.415 |
lpg1940 | aas | lpg1940 | lpg0597 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 2-acylglycerophosphoethanolamine acyltransferase. | 0.789 |
lpg1940 | lpg2179 | lpg1940 | lpg2179 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Peptide synthetase, non-ribosomal. | 0.997 |
lpg1940 | lpg2403 | lpg1940 | lpg2403 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.944 |
page 1 of 4