Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hydA | hydG-2 | lpg2467 | lpg2469 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase/sulfur reductase gamma subunit. | 0.963 |
hydA | hypB | lpg2467 | lpg2475 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase expression/formation protein HypB. | 0.756 |
hydA | hypC | lpg2467 | lpg2473 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase expression/formation protein HypC. | 0.803 |
hydA | hypD | lpg2467 | lpg2472 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.855 |
hydA | hypE | lpg2467 | lpg2471 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase expression/formation protein HypE. | 0.854 |
hydA | hypF | lpg2467 | lpg2474 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.869 |
hydA | lpg0947 | lpg2467 | lpg0947 | Cytochrome c3 hydrogenase alpha chain. | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | 0.813 |
hydA | lpg2468 | lpg2467 | lpg2468 | Cytochrome c3 hydrogenase alpha chain. | Sulfhydrogenase delta subunit. | 0.999 |
hydA | lpg2470 | lpg2467 | lpg2470 | Cytochrome c3 hydrogenase alpha chain. | Cytochrome c3 hydrogenase alpha (or beta) chain. | 0.981 |
hydA | vhtD | lpg2467 | lpg2466 | Cytochrome c3 hydrogenase alpha chain. | Hydrogenase expression/formation protein. | 0.963 |
hydG-2 | hydA | lpg2469 | lpg2467 | Hydrogenase/sulfur reductase gamma subunit. | Cytochrome c3 hydrogenase alpha chain. | 0.963 |
hydG-2 | hypB | lpg2469 | lpg2475 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase expression/formation protein HypB. | 0.775 |
hydG-2 | hypC | lpg2469 | lpg2473 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase expression/formation protein HypC. | 0.800 |
hydG-2 | hypD | lpg2469 | lpg2472 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.800 |
hydG-2 | hypE | lpg2469 | lpg2471 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase expression/formation protein HypE. | 0.800 |
hydG-2 | hypF | lpg2469 | lpg2474 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.800 |
hydG-2 | lpg0947 | lpg2469 | lpg0947 | Hydrogenase/sulfur reductase gamma subunit. | 2-oxoglutarate ferredoxin oxidoreductase alpha subunit. | 0.817 |
hydG-2 | lpg2468 | lpg2469 | lpg2468 | Hydrogenase/sulfur reductase gamma subunit. | Sulfhydrogenase delta subunit. | 0.963 |
hydG-2 | lpg2470 | lpg2469 | lpg2470 | Hydrogenase/sulfur reductase gamma subunit. | Cytochrome c3 hydrogenase alpha (or beta) chain. | 0.997 |
hydG-2 | vhtD | lpg2469 | lpg2466 | Hydrogenase/sulfur reductase gamma subunit. | Hydrogenase expression/formation protein. | 0.943 |
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