Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lpg0724 | lpg2521 | lpg0724 | lpg2521 | Hypothetical periplasmic or secreted lipoprotein. | Transmembrane protein. | 0.677 |
lpg2520 | lpg2521 | lpg2520 | lpg2521 | Hypothetical protein. | Transmembrane protein. | 0.548 |
lpg2521 | lpg0724 | lpg2521 | lpg0724 | Transmembrane protein. | Hypothetical periplasmic or secreted lipoprotein. | 0.677 |
lpg2521 | lpg2520 | lpg2521 | lpg2520 | Transmembrane protein. | Hypothetical protein. | 0.548 |
lpg2521 | lpg2991 | lpg2521 | lpg2991 | Transmembrane protein. | Hemolysin, lipoprotein. | 0.478 |
lpg2521 | lpg2992 | lpg2521 | lpg2992 | Transmembrane protein. | Periplasmic protein. | 0.478 |
lpg2521 | osmY | lpg2521 | lpg0382 | Transmembrane protein. | Osmotically inducible protein Y. | 0.788 |
lpg2521 | osmY-2 | lpg2521 | lpg2259 | Transmembrane protein. | Periplasmic, osmotically inducible protein Y-like. | 0.478 |
lpg2991 | lpg2521 | lpg2991 | lpg2521 | Hemolysin, lipoprotein. | Transmembrane protein. | 0.478 |
lpg2991 | lpg2992 | lpg2991 | lpg2992 | Hemolysin, lipoprotein. | Periplasmic protein. | 0.839 |
lpg2992 | lpg2521 | lpg2992 | lpg2521 | Periplasmic protein. | Transmembrane protein. | 0.478 |
lpg2992 | lpg2991 | lpg2992 | lpg2991 | Periplasmic protein. | Hemolysin, lipoprotein. | 0.839 |
osmY | lpg2521 | lpg0382 | lpg2521 | Osmotically inducible protein Y. | Transmembrane protein. | 0.788 |
osmY-2 | lpg2521 | lpg2259 | lpg2521 | Periplasmic, osmotically inducible protein Y-like. | Transmembrane protein. | 0.478 |