STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpg2679D-isomer specific 2-hydroxyacid dehydrogenase. (314 aa)    
Predicted Functional Partners:
lpg1634
Oxidase.
   
 0.811
lpg2581
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
  
 
 0.702
lpg2261
Phosphate acetyl/butyryltransferase family protein) includes: (de)hydratase mit MaoC domain).
  
 0.701
lpg2678
Hypothetical protein.
       0.682
lpg0947
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
    
  0.664
lpg0466
Oxaloacetate decarboxylase alpha subunit.
    
  0.653
pykA
Pyruvate kinase II; Belongs to the pyruvate kinase family.
  
 0.593
gabT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.579
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 0.561
lpg2681
4-hydroxy-2-oxovalerate aldolase.
  
 
 0.552
Your Current Organism:
Legionella pneumophila Philadelphia
NCBI taxonomy Id: 272624
Other names: L. pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Legionella pneumophila subsp. pneumophila str. Philadelphia-1, Legionella pneumophila subsp. pneumophila strain Philadelphia 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.