STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin0781Lin0781 protein. (1475 aa)    
Predicted Functional Partners:
lin2818
Lin2818 protein.
 
    0.675
lin1675
Similar to Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.585
pykA
Highly similar to pyruvate kinases.
  
  
 0.519
lin1130
Lin1130 protein; Similar to NADPH-dependent butanol dehydrogenase.
   
  
 0.468
pduQ
PduQ protein; Similar to NADPH-dependent butanol dehydrogenase.
   
  
 0.468
lin0845
Lin0845 protein; Similar to transcription regulator TetR/AcrR family.
 
   
 0.453
lin0780
Lin0780 protein; Similar to amino acid transporter.
       0.440
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
 
   
 0.430
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
     
 0.430
lin2279
Lin2279 protein; Similar to transcriptional regulator (tetR family).
 
   
 0.427
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.