STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin0801Lin0801 protein; Similar to two-component response regulators. (240 aa)    
Predicted Functional Partners:
lin0802
Lin0802 protein; Similar to two-component sensor histidine kinases.
 
  
 0.948
lin0043
Lin0043 protein; Similar to sensor histidine kinase (AgrC from Staphylococcus).
 
  
 0.587
lin2119
Histidine kinase; Similar to two-component sensor histidine kinase.
 
  
 0.546
lin0697
Lin0697 protein; Similar to CheA activity-modulating chemotaxis protein CheV.
  
   
 0.451
lin0041
Putative AgrB-like protein; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
  
 0.404
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.400
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.