STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin1098Lin1098 protein; Similar to ABC transporters, ATP-binding proteins. (548 aa)    
Predicted Functional Partners:
lin1097
Lin1097 protein; Similar to ABC transporters, ATP-binding proteins.
 
  
0.855
lin2639
Phosphate import ATP-binding protein PstB 2; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.676
lin0467
Similar to unknown proteins.
  
     0.622
lin0841
Lin0841 protein; Similar to amino acid ABC transporter, ATP-binding protein.
 
      0.615
lin2353
Lin2353 protein; Similar to amino acid ABC transporter (ATP-binding protein).
 
     
0.567
lin1095
Similar to unknown proteins.
 
     0.559
lin1096
Lin1096 protein; Similar to transcription regulators.
 
    0.536
lin1094
Lin1094 protein.
 
     0.519
dnaK
Class I heat-shock protein (molecular chaperone) DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.518
lin0597
Lin0597 protein; Similar to DNA photolyase.
  
 
 0.465
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.