Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lin0036 | lin1205 | gene:17564347 | gene:17565536 | Similar to arginine deiminase. | Lin1205 protein. | 0.633 |
lin0141 | lin0213 | gene:17564453 | gene:17564525 | Putative peptidoglycan bound protein (LPXTG motif). | Lin0213 protein. | 0.620 |
lin0141 | lin0296 | gene:17564453 | gene:17564623 | Putative peptidoglycan bound protein (LPXTG motif). | Lin0296 protein. | 0.711 |
lin0141 | lin0352 | gene:17564453 | gene:17564679 | Putative peptidoglycan bound protein (LPXTG motif). | Lin0352 protein; Similar to cell surface proteins (LPXTG motif). | 0.778 |
lin0141 | lin0457 | gene:17564453 | gene:17564783 | Putative peptidoglycan bound protein (LPXTG motif). | Putative peptidoglycan bound protein (LPXTG motif). | 0.799 |
lin0141 | lin0514 | gene:17564453 | gene:17564840 | Putative peptidoglycan bound protein (LPXTG motif). | Similar to internalin protein, putative peptidoglycan bound protein (LPXTG motif). | 0.787 |
lin0141 | lin0619 | gene:17564453 | gene:17564945 | Putative peptidoglycan bound protein (LPXTG motif). | Similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif). | 0.786 |
lin0141 | lin0636 | gene:17564453 | gene:17564962 | Putative peptidoglycan bound protein (LPXTG motif). | Peptidoglycan bound protein (LPXTG motif) similar to adhesin. | 0.772 |
lin0141 | lin1205 | gene:17564453 | gene:17565536 | Putative peptidoglycan bound protein (LPXTG motif). | Lin1205 protein. | 0.653 |
lin0141 | lin2975 | gene:17564453 | gene:17567362 | Putative peptidoglycan bound protein (LPXTG motif). | Lin2975 protein. | 0.769 |
lin0213 | lin0141 | gene:17564525 | gene:17564453 | Lin0213 protein. | Putative peptidoglycan bound protein (LPXTG motif). | 0.620 |
lin0213 | lin0296 | gene:17564525 | gene:17564623 | Lin0213 protein. | Lin0296 protein. | 0.494 |
lin0213 | lin0352 | gene:17564525 | gene:17564679 | Lin0213 protein. | Lin0352 protein; Similar to cell surface proteins (LPXTG motif). | 0.549 |
lin0213 | lin0457 | gene:17564525 | gene:17564783 | Lin0213 protein. | Putative peptidoglycan bound protein (LPXTG motif). | 0.640 |
lin0213 | lin0514 | gene:17564525 | gene:17564840 | Lin0213 protein. | Similar to internalin protein, putative peptidoglycan bound protein (LPXTG motif). | 0.662 |
lin0213 | lin0619 | gene:17564525 | gene:17564945 | Lin0213 protein. | Similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif). | 0.661 |
lin0213 | lin0636 | gene:17564525 | gene:17564962 | Lin0213 protein. | Peptidoglycan bound protein (LPXTG motif) similar to adhesin. | 0.678 |
lin0213 | lin1205 | gene:17564525 | gene:17565536 | Lin0213 protein. | Lin1205 protein. | 0.766 |
lin0213 | lin2975 | gene:17564525 | gene:17567362 | Lin0213 protein. | Lin2975 protein. | 0.621 |
lin0296 | lin0141 | gene:17564623 | gene:17564453 | Lin0296 protein. | Putative peptidoglycan bound protein (LPXTG motif). | 0.711 |
page 1 of 5