Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lin0719 | lin1535 | gene:17565046 | gene:17565866 | Similar to flagellar basal-body rod protein flgC. | Similar to unknown proteins. | 0.414 |
lin0967 | lin1535 | gene:17565297 | gene:17565866 | NAD kinase 1; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Similar to unknown proteins. | 0.519 |
lin0967 | lin1628 | gene:17565297 | gene:17565959 | NAD kinase 1; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.919 |
lin1533 | lin1534 | gene:17565864 | gene:17565865 | Lin1533 protein; Similar to O-methyltransferase. | Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.674 |
lin1533 | lin1535 | gene:17565864 | gene:17565866 | Lin1533 protein; Similar to O-methyltransferase. | Similar to unknown proteins. | 0.402 |
lin1534 | lin1533 | gene:17565865 | gene:17565864 | Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Lin1533 protein; Similar to O-methyltransferase. | 0.674 |
lin1534 | lin1535 | gene:17565865 | gene:17565866 | Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Similar to unknown proteins. | 0.512 |
lin1535 | lin0719 | gene:17565866 | gene:17565046 | Similar to unknown proteins. | Similar to flagellar basal-body rod protein flgC. | 0.414 |
lin1535 | lin0967 | gene:17565866 | gene:17565297 | Similar to unknown proteins. | NAD kinase 1; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.519 |
lin1535 | lin1533 | gene:17565866 | gene:17565864 | Similar to unknown proteins. | Lin1533 protein; Similar to O-methyltransferase. | 0.402 |
lin1535 | lin1534 | gene:17565866 | gene:17565865 | Similar to unknown proteins. | Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.512 |
lin1535 | lin1628 | gene:17565866 | gene:17565959 | Similar to unknown proteins. | NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.519 |
lin1535 | nifJ | gene:17565866 | gene:17565151 | Similar to unknown proteins. | NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase. | 0.419 |
lin1628 | lin0967 | gene:17565959 | gene:17565297 | NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | NAD kinase 1; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.919 |
lin1628 | lin1535 | gene:17565959 | gene:17565866 | NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Similar to unknown proteins. | 0.519 |
nifJ | lin1535 | gene:17565151 | gene:17565866 | NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase. | Similar to unknown proteins. | 0.419 |