STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2393Lin2393 protein. (518 aa)    
Predicted Functional Partners:
lin2392
Similar to protein gp4 [Bacteriophage A118].
  
    0.871
lin2394
Lin2394 protein.
  
    0.781
lin2395
Lin2395 protein; Some similarities to phage-related terminase small subunit homolog yqaS.
       0.759
lin2396
Lin2396 protein.
       0.627
lin2391
Lin2391 protein.
       0.535
lin2390
Similar to main capsid protein Gp34 - Lactobacillus delbrueckii subsp. bulgaricus phage mv4.
       0.523
lin0115
Major tail shaft protein [Bacteriophage A118].
  
    0.504
lin0107
Protein gp4 [Bacteriophage A118].
  
    0.499
lin2387
Lin2387 protein.
       0.483
lin2388
Lin2388 protein.
       0.483
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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