Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lin0107 | lin0115 | gene:17564419 | gene:17564427 | Protein gp4 [Bacteriophage A118]. | Major tail shaft protein [Bacteriophage A118]. | 0.648 |
lin0107 | lin2390 | gene:17564419 | gene:17566751 | Protein gp4 [Bacteriophage A118]. | Similar to main capsid protein Gp34 - Lactobacillus delbrueckii subsp. bulgaricus phage mv4. | 0.756 |
lin0107 | lin2393 | gene:17564419 | gene:17566754 | Protein gp4 [Bacteriophage A118]. | Lin2393 protein. | 0.499 |
lin0107 | lin2394 | gene:17564419 | gene:17566755 | Protein gp4 [Bacteriophage A118]. | Lin2394 protein. | 0.721 |
lin0115 | lin0107 | gene:17564427 | gene:17564419 | Major tail shaft protein [Bacteriophage A118]. | Protein gp4 [Bacteriophage A118]. | 0.648 |
lin0115 | lin2393 | gene:17564427 | gene:17566754 | Major tail shaft protein [Bacteriophage A118]. | Lin2393 protein. | 0.504 |
lin2387 | lin2388 | gene:17566748 | gene:17566749 | Lin2387 protein. | Lin2388 protein. | 0.773 |
lin2387 | lin2390 | gene:17566748 | gene:17566751 | Lin2387 protein. | Similar to main capsid protein Gp34 - Lactobacillus delbrueckii subsp. bulgaricus phage mv4. | 0.752 |
lin2387 | lin2391 | gene:17566748 | gene:17566752 | Lin2387 protein. | Lin2391 protein. | 0.690 |
lin2387 | lin2392 | gene:17566748 | gene:17566753 | Lin2387 protein. | Similar to protein gp4 [Bacteriophage A118]. | 0.483 |
lin2387 | lin2393 | gene:17566748 | gene:17566754 | Lin2387 protein. | Lin2393 protein. | 0.483 |
lin2387 | lin2394 | gene:17566748 | gene:17566755 | Lin2387 protein. | Lin2394 protein. | 0.468 |
lin2387 | lin2395 | gene:17566748 | gene:17566756 | Lin2387 protein. | Lin2395 protein; Some similarities to phage-related terminase small subunit homolog yqaS. | 0.468 |
lin2387 | lin2396 | gene:17566748 | gene:17566757 | Lin2387 protein. | Lin2396 protein. | 0.403 |
lin2388 | lin2387 | gene:17566749 | gene:17566748 | Lin2388 protein. | Lin2387 protein. | 0.773 |
lin2388 | lin2390 | gene:17566749 | gene:17566751 | Lin2388 protein. | Similar to main capsid protein Gp34 - Lactobacillus delbrueckii subsp. bulgaricus phage mv4. | 0.752 |
lin2388 | lin2391 | gene:17566749 | gene:17566752 | Lin2388 protein. | Lin2391 protein. | 0.690 |
lin2388 | lin2392 | gene:17566749 | gene:17566753 | Lin2388 protein. | Similar to protein gp4 [Bacteriophage A118]. | 0.483 |
lin2388 | lin2393 | gene:17566749 | gene:17566754 | Lin2388 protein. | Lin2393 protein. | 0.483 |
lin2388 | lin2394 | gene:17566749 | gene:17566755 | Lin2388 protein. | Lin2394 protein. | 0.468 |
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