STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2717Lin2717 protein; Similar to Chain A, Dihydrofolate Reductase. (174 aa)    
Predicted Functional Partners:
lin2716
Lin2716 protein; Similar to nicotinamidase.
  
  
 0.924
lin2718
Zinc-type alcohol dehydrogenase-like protein; Similar to zinc-binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
  
 0.924
lin2715
Lin2715 protein.
  
    0.762
lin2891
Lin2891 protein; Similar to B. subtilis stress protein YdaG.
  
    0.705
lin1988
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
  
 0.697
lin0913
Lin0913 protein; Similar to succinate semialdehyde dehydrogenase.
   
  
 0.664
lin0674
Lin0674 protein; Similar to oxidoreductase.
   
  
 0.663
lin0787
Lin0787 protein; Similar to B. subtilis YwnB protein.
  
    0.663
lin0956
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
   
  
 0.660
lin0181
Lin0181 protein; Similar to E. coli YjdJ protein.
  
    0.658
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.