STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2974Lin2974 protein; Similar to transcriptional regulator. (341 aa)    
Predicted Functional Partners:
lin1845
Lin1845 protein; Similar to glutamate synthase (large subunit).
    
 
 0.801
lin0764
Lin0764 protein; Similar to transcriptional regulator (LacI family).
  
   
 0.757
lin2973
Similar to Sucrose phosphorylase.
 
  
 0.594
lin2972
Lin2972 protein; Similar to sugar binding protein (ABC transporter).
 
  
 0.581
pykA
Highly similar to pyruvate kinases.
    
 
 0.484
ptsH
PTS phosphocarrier protein Hpr (histidine containing protein); General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.
   
 
 0.468
lin0947
Lin0947 protein; Similar to transcription regulator.
  
 
 
 0.456
lin2968
Lin2968 protein; Highly similar to an E. coli protein.
 
    0.454
lin0026
Lin0026 protein; Similar to PTS system, beta-glucosides specific enzyme IIABC.
  
  
 0.441
lin0697
Lin0697 protein; Similar to CheA activity-modulating chemotaxis protein CheV.
    
 
 0.427
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.