STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase 1; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (313 aa)    
Predicted Functional Partners:
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
 
 0.983
pykA
Highly similar to pyruvate kinases.
  
 0.979
pycA
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.931
lin2029
Lin2029 protein; Similar to malolactic enzyme (malate dehydrogenase).
  
 0.931
aspB
Aminotransferase; Similar to aspartate aminotransferases.
  
 0.926
pflB
Pyruvate formate-lyase.
   
 
 0.916
lin1775
Lin1775 protein; Similar to L-lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
  
  
 
0.916
lin0730
Lin0730 protein; Similar to pyruvate oxidase; Belongs to the TPP enzyme family.
  
 0.915
PdhB
PdhB protein; Highly similar to pyruvate dehydrogenase (E1 beta subunit).
   
 0.915
BfmBAB
BfmBAB protein; Similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit).
   
 0.915
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.