STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin1961Manganese-binding lipoprotein MntA; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Belongs to the bacterial solute-binding protein 9 family. (310 aa)    
Predicted Functional Partners:
lin1962
Manganese transport system membrane protein MntC; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Belongs to the ABC-3 integral membrane protein family.
 
 0.999
lin1963
Manganese transport system ATP-binding protein MntB; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
 
 0.999
zurM
Metal (zinc) transport protein (ABC transporter, permease protein).
  
 0.897
lin0193
Lin0193 protein; Similar to high-affinity zinc ABC transporter (membrane protein).
 
  
 0.873
zurA
Metal (zinc) transport protein(ABC transporter, ATP-binding protein); Involved in a zinc uptake transport system.
 
  
 0.870
lin0192
Lin0192 protein; Similar to high-affinity zinc ABC transporter (ATP-binding protein).
 
  
 0.688
lin1463
Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.586
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.512
lin1964
Lin1964 protein; Similar to transcriptional regulator (MarR family).
  
  
 0.509
lin1995
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.469
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.