STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin1962Manganese transport system membrane protein MntC; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Belongs to the ABC-3 integral membrane protein family. (280 aa)    
Predicted Functional Partners:
lin1961
Manganese-binding lipoprotein MntA; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
lin1963
Manganese transport system ATP-binding protein MntB; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
 0.999
lin1463
Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.923
zurA
Metal (zinc) transport protein(ABC transporter, ATP-binding protein); Involved in a zinc uptake transport system.
 
 
 0.923
lin0191
Lin0191 protein; Similar to a probable high-affinity zinc ABC transporter (Zn(II)-binding lipoprotein); Belongs to the bacterial solute-binding protein 9 family.
  
 0.906
lin1779
Lin1779 protein; Similar to ABC transporter and adhesion proteins; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.889
lin0192
Lin0192 protein; Similar to high-affinity zinc ABC transporter (ATP-binding protein).
 
 
 0.798
mutM
Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
      
 0.556
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
      
 0.555
lin0193
Lin0193 protein; Similar to high-affinity zinc ABC transporter (membrane protein).
  
  
 
0.520
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.