STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin1991HTH-type transcriptional regulator MntR; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (142 aa)    
Predicted Functional Partners:
fur
Fur protein; Similar to transcriptional regulator (Fur family); Belongs to the Fur family.
  
  
 0.643
lin1463
Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.609
lin1963
Manganese transport system ATP-binding protein MntB; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily.
 
  
 0.556
lin1625
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.547
lin0435
Conserved membrane protein.
  
  
 0.544
lin1791
Lin1791 protein; Similar to transcription regulators (Fur family), PerR in B. subtilis; Belongs to the Fur family.
  
  
 0.522
zurR
Transcriptional regulator ZurR (ferric uptake regulation); Probably required for the zinc-specific repression of the operon zuRMA implicated in zinc uptake; Belongs to the Fur family.
  
  
 0.514
lin1990
Formate--tetrahydrofolate ligase; Similar to formyl-tetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.
       0.495
rplQ
Ribosomal protein L17.
      
 0.480
lin1802
Lin1802 protein; Similar to CDP-abequose synthase.
   
    0.473
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.