STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2891Lin2891 protein; Similar to B. subtilis stress protein YdaG. (139 aa)    
Predicted Functional Partners:
lin0675
Lin0675 protein.
  
    0.897
lin1642
Lin1642 protein; Similar to general stress protein.
  
  
 0.707
lin2261
Similar to B. subtilis YwmG protein.
  
    0.706
lin0611
Lin0611 protein; Weakly similar to transcription regulator.
  
    0.705
lin2717
Lin2717 protein; Similar to Chain A, Dihydrofolate Reductase.
  
    0.705
lin2490
Conserved hypothetical protein similar to B. subtilis YhfK protein.
 
    0.703
lin0674
Lin0674 protein; Similar to oxidoreductase.
  
  
 0.681
lin0787
Lin0787 protein; Similar to B. subtilis YwnB protein.
  
  
 0.670
lin0543
Similar to tagatose-1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
  
 0.663
lin0913
Lin0913 protein; Similar to succinate semialdehyde dehydrogenase.
   
  
 0.663
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.