STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2913Glutathione biosynthesis bifunctional protein GshAB; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. (776 aa)    
Predicted Functional Partners:
lin0977
Similar to branched-chain amino acid aminotransferase.
   
 
 0.910
glnA
Highly similar to glutamine synthetases.
  
 
 0.884
lin1787
Lin1787 protein; Similar to cystathionine beta-lyase.
    
 0.881
cysK
Highly similar to cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.879
lin1844
Lin1844 protein; Similar to glutamate synthase (small subunit).
     
 0.869
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.837
lin0569
Similar to NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.824
aspB
Aminotransferase; Similar to aspartate aminotransferases.
  
 
 0.824
lin1845
Lin1845 protein; Similar to glutamate synthase (large subunit).
    
 0.817
lin2463
Glutamate decarboxylase beta; Converts internalized glutamate to GABA and increases the internal pH. Involved in glutamate-dependent acid resistance in gastric fluid (By similarity).
    
 0.810
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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