STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin2933Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). (231 aa)    
Predicted Functional Partners:
lin0955
Lin0955 protein; Similar to N-acetylglucosamine-6P-phosphate deacetylase (EC 3.5.1.25).
 
  
 0.936
lin2213
Lin2213 protein; Similar to N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.935
lin2928
Lin2928 protein; Similar to transcription regulator.
  
 0.849
lin2927
Lin2927 protein; Similar to E. coli RpiR transcription regulator.
 
   
 0.798
lin2932
Lin2932 protein; Similar to dehydrogenase.
  
  
 0.772
lin2931
Lin2931 protein; Similar to phosphotransferase system mannitol-specific enzyme IIBC.
  
    0.747
lin1474
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.676
lin0026
Lin0026 protein; Similar to PTS system, beta-glucosides specific enzyme IIABC.
     
 0.549
lin2930
Lin2930 protein; Similar to phosphatase.
  
    0.529
lin0770
Lin0770 protein; Similar to transcription regulator (repressor).
 
  
 0.522
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.