Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CCC_00088 | CCC_00090 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | 0.986 |
CCC_00088 | CCC_00091 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP transporter solute receptor unknown substrate 1. | 0.982 |
CCC_00088 | CCC_00620 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP transporter solute receptor TAXI family precursor. | 0.748 |
CCC_00088 | CCC_00667 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP dicarboxylate transporter DctM subunit unknown substrate 4. | 0.982 |
CCC_00088 | CCC_01188 | TRAP-type C4-dicarboxylate transport system periplasmic component. | Hypothetical protein. | 0.478 |
CCC_00088 | CCC_01852 | TRAP-type C4-dicarboxylate transport system periplasmic component. | Hypothetical protein. | 0.538 |
CCC_00088 | CCC_02473 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.704 |
CCC_00088 | CCC_02619 | TRAP-type C4-dicarboxylate transport system periplasmic component. | TRAP transporter solute receptor TAXI family precursor. | 0.734 |
CCC_00089 | CCC_00090 | DUF1850 domain-containing protein. | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | 0.983 |
CCC_00089 | CCC_00091 | DUF1850 domain-containing protein. | TRAP transporter solute receptor unknown substrate 1. | 0.959 |
CCC_00089 | CCC_00620 | DUF1850 domain-containing protein. | TRAP transporter solute receptor TAXI family precursor. | 0.786 |
CCC_00089 | CCC_01188 | DUF1850 domain-containing protein. | Hypothetical protein. | 0.561 |
CCC_00089 | CCC_01852 | DUF1850 domain-containing protein. | Hypothetical protein. | 0.599 |
CCC_00089 | CCC_02619 | DUF1850 domain-containing protein. | TRAP transporter solute receptor TAXI family precursor. | 0.636 |
CCC_00090 | CCC_00088 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | TRAP-type C4-dicarboxylate transport system periplasmic component. | 0.986 |
CCC_00090 | CCC_00089 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | DUF1850 domain-containing protein. | 0.983 |
CCC_00090 | CCC_00091 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | TRAP transporter solute receptor unknown substrate 1. | 0.998 |
CCC_00090 | CCC_00620 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | TRAP transporter solute receptor TAXI family precursor. | 0.959 |
CCC_00090 | CCC_00667 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | TRAP dicarboxylate transporter DctM subunit unknown substrate 4. | 0.882 |
CCC_00090 | CCC_01188 | TRAP transporter 4TM/12TM fusion protein unknown substrate 1. | Hypothetical protein. | 0.808 |
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