Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_00136TonB-dependent receptor. (625 aa)    
Predicted Functional Partners:
CCC_03249
Alkaline phosphatase.
 
 
 
 0.894
CCC_03530
Ferric siderophore transport system periplasmic binding protein TonB.
 
 0.877
CCC_04216
Alkaline phosphatase.
  
 
 
 0.869
CCC_04080
Glycine-rich cell wall structural protein precursor.
  
 
 
 0.859
CCC_01797
Putative TolA protein.
  
 0.857
CCC_04025
Ferric siderophore transport system periplasmic binding protein TonB.
  
 0.857
CCC_04209
Ferric siderophore transport system periplasmic binding protein TonB.
  
 0.857
CCC_02524
Magnetosome protein MamJ.
  
 0.856
CCC_00135
Signal transduction histidine kinase.
 
     0.757
CCC_01947
Putative calcium binding hemolysin protein.
  
   
 0.740
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.