STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_00430Bicarbonate transport system permease protein. (286 aa)    
Predicted Functional Partners:
CCC_00429
Nitrate ABC transporter nitrate-binding protein.
 
 
 0.996
CCC_00431
Nitrate ABC transporter ATP-binding protein.
 
 0.996
CCC_00432
Nitrate ABC transporter nitrate-binding protein.
 
 
 0.992
CCC_00435
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.984
CCC_04195
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter ATP-binding subunit SsuB.
 
 0.944
CCC_04193
Alkanesulfonates-binding protein.
 
 
 0.904
CCC_03265
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter ATP-binding subunit SsuB.
 
 0.900
CCC_04010
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter ATP-binding subunit SsuB.
 
 0.874
CCC_00433
Nitrite reductase NAD(P)H large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.850
napA
Periplasmic nitrate reductase precursor; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.837
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.